Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | SAMN05660350_03579 | Not Available | Negative | 3686269 - 3687132 | 30165.9 |
| phenylalanyl-trna synthetase beta subunit | SAMN05660350_03580 | Not Available | Negative | 3687125 - 3689611 | 87420.5 |
| phenylalanyl-trna synthetase, alpha subunit | SAMN05660350_03581 | Not Available | Negative | 3689611 - 3690678 | 39042.2 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN05660350_03582 | Not Available | Positive | 3690920 - 3693181 | 80247.1 |
| uncharacterized protein, rmlc-like cupin domain | SAMN05660350_03583 | Not Available | Positive | 3693306 - 3693689 | 13366.4 |
| rna methyltransferase, trmh family | SAMN05660350_03584 | Not Available | Negative | 3693708 - 3694493 | 26344.7 |
| large subunit ribosomal protein l20 | SAMN05660350_03585 | Not Available | Negative | 3694653 - 3695036 | 14264.3 |
| large subunit ribosomal protein l35 | SAMN05660350_03586 | Not Available | Negative | 3695066 - 3695260 | 7408.06 |
| translation initiation factor if-3 | SAMN05660350_03587 | Not Available | Negative | 3695436 - 3696059 | 23221.0 |
| ph domain-containing protein | SAMN05660350_03588 | Not Available | Negative | 3696461 - 3696946 | 17054.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

