Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase regulating citrate/malate metabolism | SAMN05660350_03548 | Not Available | Negative | 3655669 - 3657273 | 55520.5 |
| putative tricarboxylic transport membrane protein | SAMN05660350_03549 | Not Available | Positive | 3657612 - 3658619 | 34433.0 |
| putative tricarboxylic transport membrane protein | SAMN05660350_03550 | Not Available | Positive | 3658616 - 3659128 | 17538.8 |
| putative tricarboxylic transport membrane protein | SAMN05660350_03551 | Not Available | Positive | 3659128 - 3660726 | 55283.3 |
| ethanolamine ammonia-lyase light chain | SAMN05660350_03552 | Not Available | Negative | 3661140 - 3661883 | 25561.3 |
| ethanolamine ammonia-lyase heavy chain | SAMN05660350_03553 | Not Available | Negative | 3661880 - 3663292 | 49312.1 |
| amino acid permease | SAMN05660350_03554 | Not Available | Negative | 3663289 - 3663702 | 14489.8 |
| ethanolamine permease | SAMN05660350_03555 | Not Available | Negative | 3663699 - 3664757 | 35980.0 |
| gaf domain-containing protein | SAMN05660350_03556 | Not Available | Positive | 3664958 - 3665683 | 25413.0 |
| short-chain dehydrogenase | SAMN05660350_03557 | Not Available | Negative | 3665712 - 3666611 | 31335.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

