Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate reductase | SAMN05660350_03538 | Not Available | Positive | 3648098 - 3648652 | 19535.1 |
| regulator of ribonuclease activity a | SAMN05660350_03539 | Not Available | Negative | 3648748 - 3649242 | 17051.3 |
| 3-isopropylmalate dehydrogenase | SAMN05660350_03540 | Not Available | Negative | 3649292 - 3650386 | 38580.9 |
| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase | SAMN05660350_03541 | Not Available | Negative | 3650392 - 3651804 | 48699.8 |
| mannose-6-phosphate isomerase, cupin superfamily | SAMN05660350_03542 | Not Available | Negative | 3651801 - 3652259 | 16346.1 |
| quinol monooxygenase ygin | SAMN05660350_03543 | Not Available | Negative | 3652256 - 3652567 | 11292.3 |
| malate/lactate/ureidoglycolate dehydrogenase, ldh2 family | SAMN05660350_03544 | Not Available | Positive | 3652637 - 3653698 | 36843.8 |
| transcriptional regulator, gntr family | SAMN05660350_03545 | Not Available | Positive | 3653695 - 3654417 | 25822.6 |
| universal stress protein family protein | SAMN05660350_03546 | Not Available | Negative | 3654498 - 3654893 | 14012.8 |
| response regulator of citrate/malate metabolism | SAMN05660350_03547 | Not Available | Negative | 3654977 - 3655672 | 25104.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

