Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN05660350_03488 | Not Available | Positive | 3602800 - 3603633 | 28742.7 |
| hypothetical protein | SAMN05660350_03489 | Not Available | Positive | 3603630 - 3604603 | 35482.3 |
| hypothetical protein | SAMN05660350_03490 | Not Available | Positive | 3604604 - 3604860 | 9311.36 |
| protein of unknown function | SAMN05660350_03491 | Not Available | Negative | 3604881 - 3605222 | 12778.8 |
| uncharacterized hhh-gpd family protein | SAMN05660350_03492 | Not Available | Negative | 3605381 - 3605983 | 21738.1 |
| antitoxin pard1/3/4 | SAMN05660350_03493 | Not Available | Positive | 3606096 - 3606314 | 8329.67 |
| mrna interferase mazf | SAMN05660350_03494 | Not Available | Positive | 3606311 - 3606628 | 11788.2 |
| ribd c-terminal domain-containing protein | SAMN05660350_03495 | Not Available | Positive | 3607205 - 3607849 | 23867.8 |
| secd/secf fusion protein | SAMN05660350_03496 | Not Available | Negative | 3608025 - 3610367 | 80025.7 |
| monovalent cation:h+ antiporter-2, cpa2 family | SAMN05660350_03497 | Not Available | Negative | 3610468 - 3610725 | 8768.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

