Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, gntr family | SAMN05660350_03398 | Not Available | Negative | 3498078 - 3498806 | 27079.5 |
| 5-dehydro-2-deoxygluconokinase | SAMN05660350_03399 | Not Available | Positive | 3499022 - 3499984 | 34046.4 |
| fructose-bisphosphate aldolase class ia, dhna family | SAMN05660350_03400 | Not Available | Positive | 3499977 - 3500915 | 33223.9 |
| 5-deoxy-glucuronate isomerase | SAMN05660350_03401 | Not Available | Positive | 3501026 - 3501937 | 32238.8 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase | SAMN05660350_03402 | Not Available | Positive | 3501934 - 3503868 | 68423.9 |
| inosose dehydratase | SAMN05660350_03403 | Not Available | Positive | 3503909 - 3504913 | 36943.3 |
| myo-inositol 2-dehydrogenase / d-chiro-inositol 1-dehydrogenase | SAMN05660350_03404 | Not Available | Positive | 3504910 - 3505983 | 37935.2 |
| myo-inositol catabolism protein iolh | SAMN05660350_03405 | Not Available | Positive | 3505980 - 3506936 | 34949.6 |
| malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase | SAMN05660350_03406 | Not Available | Positive | 3506946 - 3508439 | 53028.8 |
| hydroxypyruvate isomerase | SAMN05660350_03407 | Not Available | Negative | 3508670 - 3509449 | 27607.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

