Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arac family | SAMN05660350_03388 | Not Available | Negative | 3488957 - 3489430 | 17391.8 |
| hypothetical protein | SAMN05660350_03389 | Not Available | Negative | 3489440 - 3490138 | 24189.4 |
| hypothetical protein | SAMN05660350_03390 | Not Available | Positive | 3490325 - 3490519 | 6592.09 |
| membrane carboxypeptidase (penicillin-binding protein) | SAMN05660350_03391 | Not Available | Positive | 3490636 - 3492723 | 72994.3 |
| choline dehydrogenase | SAMN05660350_03392 | Not Available | Negative | 3492727 - 3494313 | 55985.9 |
| hypothetical protein | SAMN05660350_03393 | Not Available | Negative | 3494310 - 3494435 | 4600.49 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05660350_03394 | Not Available | Negative | 3494432 - 3495307 | 30411.1 |
| hypothetical protein | SAMN05660350_03395 | Not Available | Positive | 3495355 - 3495873 | 16777.5 |
| hypothetical protein | SAMN05660350_03396 | Not Available | Positive | 3495969 - 3496349 | 12553.3 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN05660350_03397 | Not Available | Negative | 3496466 - 3497842 | 46325.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

