Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | SAMN05660350_03328 | Not Available | Positive | 3431529 - 3432815 | 42779.9 |
| membrane protein | SAMN05660350_03329 | Not Available | Negative | 3432697 - 3433653 | 33643.6 |
| 2'-5' rna ligase | SAMN05660350_03330 | Not Available | Negative | 3433932 - 3434498 | 20416.2 |
| tryptophanyl-trna synthetase | SAMN05660350_03331 | Not Available | Negative | 3434495 - 3435514 | 36790.1 |
| histidinol-phosphate aminotransferase | SAMN05660350_03332 | Not Available | Negative | 3435578 - 3436690 | 39070.5 |
| udp-galactose 4-epimerase | SAMN05660350_03333 | Not Available | Positive | 3436839 - 3437717 | 31501.8 |
| putative hemolysin | SAMN05660350_03334 | Not Available | Negative | 3437826 - 3439160 | 47877.2 |
| uncharacterized conserved protein ykwd, contains cap (csp/antigen 5/pr1) domain | SAMN05660350_03335 | Not Available | Positive | 3439358 - 3440257 | 29702.8 |
| isocitrate dehydrogenase (nadp) | SAMN05660350_03336 | Not Available | Negative | 3440768 - 3441982 | 45058.6 |
| malate dehydrogenase (nad) | SAMN05660350_03337 | Not Available | Negative | 3442097 - 3443050 | 33291.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

