Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heterodimeric methylmalonyl-coa mutase large subunit precursor | SAMN05660350_03298 | Not Available | Negative | 3395080 - 3397287 | 79322.2 |
| heterodimeric methylmalonyl-coa mutase small subunit | SAMN05660350_03299 | Not Available | Negative | 3397284 - 3399173 | 64784.8 |
| amidohydrolase | SAMN05660350_03300 | Not Available | Negative | 3399214 - 3400461 | 43274.6 |
| carboxylate-amine ligase | SAMN05660350_03301 | Not Available | Negative | 3400577 - 3401782 | 43797.2 |
| hypothetical protein | SAMN05660350_03302 | Not Available | Negative | 3401888 - 3403408 | 53430.6 |
| purine-nucleoside phosphorylase | SAMN05660350_03303 | Not Available | Positive | 3403520 - 3404341 | 27618.0 |
| uronate dehydrogenase | SAMN05660350_03304 | Not Available | Positive | 3404367 - 3405203 | 28960.0 |
| phosphomannomutase | SAMN05660350_03305 | Not Available | Positive | 3405277 - 3406902 | 56108.6 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN05660350_03306 | Not Available | Positive | 3406911 - 3408974 | 73220.1 |
| 2-haloacid dehalogenase | SAMN05660350_03307 | Not Available | Positive | 3408971 - 3409672 | 25205.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

