Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heparin binding hemagglutinin hbha | SAMN05660350_03258 | Not Available | Negative | 3350948 - 3351682 | 25580.0 |
| transcriptional regulator, contains xre-family hth domain | SAMN05660350_03259 | Not Available | Negative | 3351679 - 3352191 | 18368.7 |
| asparaginase | SAMN05660350_03260 | Not Available | Negative | 3352280 - 3353266 | 33036.4 |
| hypothetical protein | SAMN05660350_03261 | Not Available | Negative | 3353302 - 3353859 | 20172.9 |
| hypothetical protein | SAMN05660350_03262 | Not Available | Negative | 3353888 - 3354994 | 38626.3 |
| nickel uptake regulator, fur family | SAMN05660350_03263 | Not Available | Negative | 3354994 - 3355473 | 16763.0 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05660350_03264 | Not Available | Negative | 3355651 - 3356697 | 35537.4 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN05660350_03265 | Not Available | Positive | 3357214 - 3358401 | 40792.0 |
| protein of unknown function | SAMN05660350_03266 | Not Available | Negative | 3358565 - 3359464 | 29214.2 |
| hypothetical protein | SAMN05660350_03267 | Not Available | Negative | 3359461 - 3360780 | 46294.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

