Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-inositol-3-phosphate glycosyltransferase | SAMN05660350_03248 | Not Available | Negative | 3343027 - 3344394 | 48421.9 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05660350_03249 | Not Available | Positive | 3344476 - 3345252 | 26980.1 |
| udp-n-acetylmuramate dehydrogenase | SAMN05660350_03250 | Not Available | Negative | 3345313 - 3346320 | 35721.5 |
| hypothetical protein | SAMN05660350_03251 | Not Available | Positive | 3346388 - 3347227 | 30297.2 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN05660350_03252 | Not Available | Positive | 3347505 - 3348602 | 38847.3 |
| predicted small metal-binding protein | SAMN05660350_03253 | Not Available | Positive | 3348648 - 3348824 | 6384.52 |
| methyltransferase domain-containing protein | SAMN05660350_03254 | Not Available | Positive | 3348927 - 3349790 | 30412.2 |
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domain | SAMN05660350_03255 | Not Available | Negative | 3349780 - 3350292 | 17330.7 |
| phage shock protein c (pspc) family protein | SAMN05660350_03256 | Not Available | Positive | 3350316 - 3350519 | 7434.39 |
| protein of unknown function | SAMN05660350_03257 | Not Available | Negative | 3350533 - 3350823 | 10000.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

