Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05660350_03198 | Not Available | Positive | 3293963 - 3295306 | 45891.1 |
| maoc like domain-containing protein | SAMN05660350_03199 | Not Available | Positive | 3295306 - 3296163 | 30060.2 |
| glycosyl hydrolases family 2, sugar binding domain | SAMN05660350_03200 | Not Available | Positive | 3296297 - 3298093 | 65631.9 |
| peptide/nickel transport system substrate-binding protein | SAMN05660350_03201 | Not Available | Positive | 3298322 - 3299857 | 55534.8 |
| peptide/nickel transport system permease protein | SAMN05660350_03202 | Not Available | Positive | 3299902 - 3300795 | 32007.6 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | SAMN05660350_03203 | Not Available | Negative | 3300834 - 3301995 | 39469.4 |
| o-succinylbenzoate synthase | SAMN05660350_03204 | Not Available | Negative | 3301992 - 3302927 | 32858.3 |
| o-succinylbenzoic acid--coa ligase | SAMN05660350_03205 | Not Available | Positive | 3303072 - 3304205 | 38619.5 |
| 1,4-dihydroxy-2-naphthoate prenyltransferase | SAMN05660350_03206 | Not Available | Positive | 3304208 - 3305080 | 28659.6 |
| protein of unknown function | SAMN05660350_03207 | Not Available | Negative | 3305205 - 3305519 | 11033.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

