Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaryl-coa dehydrogenase | SAMN05660350_00298 | Not Available | Positive | 281508 - 282683 | 42535.7 |
| hypothetical protein | SAMN05660350_00299 | Not Available | Negative | 282713 - 283018 | 10514.5 |
| tigr03083 family protein | SAMN05660350_00300 | Not Available | Negative | 283015 - 283668 | 23208.8 |
| dna-binding transcriptional regulator, marr family | SAMN05660350_00301 | Not Available | Positive | 283739 - 284185 | 16163.3 |
| prevent-host-death family protein | SAMN05660350_00302 | Not Available | Positive | 284268 - 284489 | 7928.46 |
| pin domain nuclease, a component of toxin-antitoxin system (pin domain) | SAMN05660350_00303 | Not Available | Positive | 284486 - 284878 | 14022.9 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN05660350_00304 | Not Available | Negative | 284888 - 285280 | 14337.9 |
| zinc transport system permease protein | SAMN05660350_00305 | Not Available | Negative | 285277 - 286299 | 34834.7 |
| zinc transport system atp-binding protein | SAMN05660350_00306 | Not Available | Negative | 286301 - 287086 | 26282.4 |
| zinc transport system substrate-binding protein | SAMN05660350_00307 | Not Available | Negative | 287083 - 288072 | 33465.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

