Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05660350_03147 | Not Available | Positive | 3237155 - 3237397 | 8080.58 |
| glycolate oxidase | SAMN05660350_03148 | Not Available | Positive | 3237465 - 3238847 | 47867.6 |
| glycolate oxidase iron-sulfur subunit | SAMN05660350_03149 | Not Available | Positive | 3238909 - 3240213 | 46655.9 |
| uncharacterized membrane protein ygae, upf0421/duf939 family | SAMN05660350_03150 | Not Available | Negative | 3240227 - 3241399 | 41525.5 |
| dna-binding transcriptional regulator, merr family | SAMN05660350_03151 | Not Available | Negative | 3241460 - 3242215 | 28758.6 |
| protein of unknown function | SAMN05660350_03152 | Not Available | Positive | 3242306 - 3242920 | 21884.5 |
| haloalkane dehalogenase | SAMN05660350_03153 | Not Available | Positive | 3242931 - 3243833 | 33661.1 |
| protein of unknown function | SAMN05660350_03154 | Not Available | Negative | 3243993 - 3244475 | 17155.3 |
| abc-2 type transport system permease protein | SAMN05660350_03155 | Not Available | Negative | 3244517 - 3245350 | 30036.5 |
| abc-2 type transport system atp-binding protein | SAMN05660350_03156 | Not Available | Negative | 3245347 - 3246309 | 33784.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

