Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN05660350_03137 | Not Available | Positive | 3225272 - 3226810 | 56052.6 |
| multiple monosaccharide abc transporter membrane protein | SAMN05660350_03138 | Not Available | Positive | 3226807 - 3228072 | 43622.2 |
| transcriptional regulator, laci family | SAMN05660350_03139 | Not Available | Positive | 3228168 - 3229214 | 36783.7 |
| sugar (pentulose or hexulose) kinase | SAMN05660350_03140 | Not Available | Positive | 3229454 - 3231049 | 56130.6 |
| l-ribulose 5-phosphate 4-epimerase | SAMN05660350_03141 | Not Available | Positive | 3231099 - 3231836 | 26089.7 |
| l-arabinose isomerase | SAMN05660350_03142 | Not Available | Positive | 3231851 - 3233359 | 54393.4 |
| arginine deiminase | SAMN05660350_03143 | Not Available | Negative | 3233429 - 3234652 | 43197.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05660350_03144 | Not Available | Positive | 3234747 - 3235514 | 26780.1 |
| hypothetical protein | SAMN05660350_03145 | Not Available | Positive | 3235668 - 3235826 | 5396.55 |
| fad/fmn-containing dehydrogenase | SAMN05660350_03146 | Not Available | Negative | 3235966 - 3237120 | 40620.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

