Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase, large subunit | SAMN05660350_03127 | Not Available | Negative | 3210718 - 3212589 | 65707.3 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN05660350_03128 | Not Available | Negative | 3213066 - 3215702 | 91298.4 |
| dihydroxy-acid dehydratase | SAMN05660350_03129 | Not Available | Negative | 3215934 - 3217661 | 59885.8 |
| helix-turn-helix domain-containing protein | SAMN05660350_03130 | Not Available | Positive | 3217837 - 3218664 | 29979.5 |
| ph domain-containing protein | SAMN05660350_03131 | Not Available | Positive | 3218689 - 3219063 | 13254.5 |
| transposase | SAMN05660350_03132 | Not Available | Negative | 3219115 - 3219443 | 11556.9 |
| fatty-acyl-coa synthase | SAMN05660350_03133 | Not Available | Negative | 3219641 - 3221257 | 58810.0 |
| hypothetical protein | SAMN05660350_03134 | Not Available | Negative | 3221319 - 3222527 | 43948.7 |
| sec-c motif-containing protein | SAMN05660350_03135 | Not Available | Positive | 3222671 - 3223606 | 32316.3 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN05660350_03136 | Not Available | Positive | 3223935 - 3225092 | 40378.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

