Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam family uncharacterized protein | SAMN05660350_00288 | Not Available | Positive | 269941 - 271869 | 71013.0 |
| radical sam-linked protein | SAMN05660350_00289 | Not Available | Positive | 271869 - 272636 | 26740.9 |
| ribonuclease e | SAMN05660350_00290 | Not Available | Positive | 272890 - 276030 | 110832.0 |
| large subunit ribosomal protein l21 | SAMN05660350_00291 | Not Available | Positive | 276236 - 276547 | 11027.4 |
| lsu ribosomal protein l27p | SAMN05660350_00292 | Not Available | Positive | 276555 - 276812 | 8928.7 |
| gtp-binding protein | SAMN05660350_00293 | Not Available | Positive | 276887 - 278452 | 55356.0 |
| glutamate 5-kinase | SAMN05660350_00294 | Not Available | Positive | 278449 - 279570 | 39169.1 |
| pyridoxamine 5'-phosphate oxidase | SAMN05660350_00295 | Not Available | Negative | 279580 - 280068 | 17967.2 |
| peptide deformylase | SAMN05660350_00296 | Not Available | Positive | 280120 - 280605 | 17476.9 |
| 2-methylisocitrate lyase, pep mutase family | SAMN05660350_00297 | Not Available | Positive | 280628 - 281410 | 27123.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

