Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l19p | SAMN05660350_03047 | Not Available | Negative | 3134668 - 3135024 | 13516.5 |
| nudix domain-containing protein | SAMN05660350_03048 | Not Available | Negative | 3135170 - 3135655 | 17534.9 |
| trna (guanine37-n1)-methyltransferase | SAMN05660350_03049 | Not Available | Negative | 3135678 - 3136421 | 26486.4 |
| 16s rrna processing protein rimm | SAMN05660350_03050 | Not Available | Negative | 3136418 - 3136966 | 19638.4 |
| hypothetical protein | SAMN05660350_03051 | Not Available | Negative | 3136985 - 3137221 | 8454.26 |
| ssu ribosomal protein s16p | SAMN05660350_03052 | Not Available | Negative | 3137225 - 3137665 | 15822.8 |
| prolyl-trna synthetase | SAMN05660350_03053 | Not Available | Negative | 3137878 - 3139614 | 63049.9 |
| hypothetical protein | SAMN05660350_03054 | Not Available | Negative | 3139752 - 3140300 | 18232.4 |
| pro-hyp dipeptidase. metallo peptidase. merops family m38 | SAMN05660350_03055 | Not Available | Negative | 3140578 - 3141672 | 38141.2 |
| signal recognition particle subunit ffh/srp54 (srp54) | SAMN05660350_03056 | Not Available | Negative | 3141669 - 3143270 | 56438.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

