Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate synthase | SAMN05660350_03025 | Not Available | Negative | 3118003 - 3118899 | 31306.7 |
| dihydrofolate reductase | SAMN05660350_03026 | Not Available | Negative | 3118909 - 3119451 | 19305.8 |
| thymidylate synthase | SAMN05660350_03027 | Not Available | Negative | 3119459 - 3120289 | 31218.0 |
| uncharacterized membrane protein ykva, duf1232 family | SAMN05660350_03028 | Not Available | Positive | 3120360 - 3120767 | 14836.9 |
| hypothetical protein | SAMN05660350_03029 | Not Available | Negative | 3120773 - 3121984 | 45070.3 |
| l-amino acid n-acyltransferase ynca | SAMN05660350_03030 | Not Available | Positive | 3122053 - 3122646 | 21098.5 |
| tigr02453 family protein | SAMN05660350_03031 | Not Available | Positive | 3122643 - 3123308 | 25175.4 |
| tetratricopeptide repeat-containing protein | SAMN05660350_03034 | Not Available | Positive | 3123797 - 3124415 | 21533.2 |
| transposase | SAMN05660350_03035 | Not Available | Negative | 3124562 - 3125182 | 23621.2 |
| zinc-finger of transposase is204/is1001/is1096/is1165 | SAMN05660350_03036 | Not Available | Negative | 3125212 - 3125913 | 25770.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

