Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombination protein reca | SAMN05660350_03005 | Not Available | Negative | 3091605 - 3092639 | 36593.9 |
| protein of unknown function | SAMN05660350_03006 | Not Available | Negative | 3092827 - 3093042 | 8100.75 |
| predicted arabinose efflux permease, mfs family | SAMN05660350_03007 | Not Available | Negative | 3093178 - 3094446 | 41359.4 |
| acyl-coa dehydrogenase | SAMN05660350_03008 | Not Available | Negative | 3094459 - 3095604 | 41936.8 |
| atp dependent helicase, lhr family | SAMN05660350_03009 | Not Available | Positive | 3095692 - 3100293 | 162982.0 |
| endonuclease-8 | SAMN05660350_03010 | Not Available | Positive | 3100401 - 3101255 | 31969.2 |
| phage shock protein a (pspa) family protein | SAMN05660350_03011 | Not Available | Negative | 3101353 - 3102186 | 29983.4 |
| fructokinase | SAMN05660350_03012 | Not Available | Positive | 3102335 - 3103351 | 34824.7 |
| acetyltransferase (gnat) family protein | SAMN05660350_03013 | Not Available | Positive | 3103348 - 3103818 | 16957.1 |
| carbohydrate abc transporter atp-binding protein, cut1 family (tc 3.a.1.1.-) | SAMN05660350_03014 | Not Available | Negative | 3103906 - 3105183 | 47299.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

