Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional repressor nrdr | SAMN05660350_02985 | Not Available | Negative | 3071760 - 3072311 | 19859.5 |
| hypothetical protein | SAMN05660350_02986 | Not Available | Negative | 3072697 - 3073338 | 22437.6 |
| lysm domain-containing protein | SAMN05660350_02987 | Not Available | Negative | 3073478 - 3074119 | 21015.2 |
| repressor lexa | SAMN05660350_02988 | Not Available | Positive | 3074417 - 3075208 | 27627.8 |
| hypothetical protein | SAMN05660350_02989 | Not Available | Negative | 3075398 - 3076447 | 35211.7 |
| pap2 superfamily protein | SAMN05660350_02990 | Not Available | Negative | 3076419 - 3077081 | 23770.3 |
| gtp-binding protein hflx | SAMN05660350_02991 | Not Available | Negative | 3077211 - 3078737 | 54117.2 |
| hypothetical protein | SAMN05660350_02992 | Not Available | Positive | 3078867 - 3079076 | 6873.63 |
| diaminopimelate epimerase | SAMN05660350_02993 | Not Available | Negative | 3079144 - 3080013 | 30118.8 |
| trna dimethylallyltransferase | SAMN05660350_02994 | Not Available | Negative | 3080010 - 3080933 | 32833.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

