Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (gnat) family protein | SAMN05660350_02975 | Not Available | Positive | 3060628 - 3060963 | 12088.7 |
| hypothetical protein | SAMN05660350_02976 | Not Available | Positive | 3061237 - 3061686 | 16327.1 |
| ketopantoate reductase | SAMN05660350_02977 | Not Available | Positive | 3061933 - 3062856 | 31823.0 |
| lysophospholipase l1 | SAMN05660350_02978 | Not Available | Negative | 3062850 - 3063464 | 21229.2 |
| hypothetical protein | SAMN05660350_02979 | Not Available | Negative | 3063511 - 3064152 | 22804.0 |
| uncharacterized conserved protein, contains pq loop repeat | SAMN05660350_02980 | Not Available | Negative | 3064325 - 3065146 | 27927.5 |
| predicted arabinose efflux permease, mfs family | SAMN05660350_02981 | Not Available | Negative | 3065263 - 3066474 | 40554.4 |
| 3-methyladenine dna glycosylase alkd | SAMN05660350_02982 | Not Available | Negative | 3066625 - 3067383 | 28605.3 |
| hypothetical protein | SAMN05660350_02983 | Not Available | Positive | 3068008 - 3068151 | 5399.48 |
| ribonucleoside-diphosphate reductase class ii | SAMN05660350_02984 | Not Available | Negative | 3068821 - 3071679 | 103445.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

