Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05660350_02955 | Not Available | Positive | 3044723 - 3045652 | 31971.7 |
| dehydrogenase (flavoprotein) | SAMN05660350_02956 | Not Available | Positive | 3045800 - 3047197 | 49027.3 |
| hypothetical protein | SAMN05660350_02957 | Not Available | Negative | 3047208 - 3048014 | 27940.1 |
| uncharacterized conserved protein ykwd, contains cap (csp/antigen 5/pr1) domain | SAMN05660350_02958 | Not Available | Positive | 3048209 - 3048832 | 21610.4 |
| hypothetical protein | SAMN05660350_02959 | Not Available | Negative | 3048848 - 3049027 | 6165.27 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05660350_02960 | Not Available | Negative | 3049024 - 3050031 | 36627.6 |
| protein of unknown function | SAMN05660350_02961 | Not Available | Positive | 3050125 - 3050646 | 18978.2 |
| dna-binding transcriptional regulator, marr family | SAMN05660350_02962 | Not Available | Positive | 3050744 - 3051268 | 18036.6 |
| predicted arabinose efflux permease, mfs family | SAMN05660350_02963 | Not Available | Positive | 3051265 - 3052452 | 38616.9 |
| hypothetical protein | SAMN05660350_02964 | Not Available | Negative | 3052526 - 3053479 | 34945.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

