Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monosaccharide abc transporter atp-binding protein, cut2 family (tc 3.a.1.2.-) | SAMN05660350_02945 | Not Available | Negative | 3032341 - 3033885 | 54635.7 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN05660350_02946 | Not Available | Negative | 3034067 - 3035242 | 39963.1 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05660350_02947 | Not Available | Negative | 3035300 - 3035959 | 23163.5 |
| nadh dehydrogenase | SAMN05660350_02948 | Not Available | Positive | 3036079 - 3037506 | 50871.2 |
| predicted esterase | SAMN05660350_02949 | Not Available | Negative | 3037633 - 3038304 | 22865.3 |
| erythromycin esterase homolog | SAMN05660350_02950 | Not Available | Negative | 3038304 - 3039602 | 48521.8 |
| short-chain dehydrogenase | SAMN05660350_02951 | Not Available | Negative | 3039606 - 3040397 | 27227.3 |
| carboxylate-amine ligase | SAMN05660350_02952 | Not Available | Negative | 3040427 - 3041557 | 40313.3 |
| amylosucrase | SAMN05660350_02953 | Not Available | Negative | 3041554 - 3043527 | 71964.3 |
| serine protease, s1-c subfamily, contains c-terminal pdz domain | SAMN05660350_02954 | Not Available | Positive | 3043625 - 3044578 | 31793.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

