Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yjef c-terminal region, hydroxyethylthiazole kinase-related/yjef n-terminal region | SAMN05660350_02925 | Not Available | Positive | 3014581 - 3016038 | 48100.5 |
| alanine racemase | SAMN05660350_02926 | Not Available | Positive | 3016112 - 3017248 | 38905.3 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05660350_02927 | Not Available | Positive | 3017248 - 3018441 | 41472.1 |
| dna polymerase | SAMN05660350_02928 | Not Available | Positive | 3018438 - 3019061 | 21499.8 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | SAMN05660350_02929 | Not Available | Positive | 3019058 - 3019513 | 15949.0 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN05660350_02930 | Not Available | Positive | 3019582 - 3019953 | 13789.2 |
| hypothetical protein | SAMN05660350_02931 | Not Available | Negative | 3019954 - 3020370 | 14717.6 |
| hypothetical protein | SAMN05660350_02932 | Not Available | Negative | 3020377 - 3020598 | 7773.26 |
| trna threonylcarbamoyl adenosine modification protein yeaz | SAMN05660350_02933 | Not Available | Positive | 3020674 - 3021312 | 21445.7 |
| transcriptional regulator, arac family with amidase-like domain | SAMN05660350_02934 | Not Available | Positive | 3021401 - 3022480 | 37219.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

