Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s13p | SAMN05660350_02905 | Not Available | Positive | 2999244 - 2999624 | 14232.3 |
| ssu ribosomal protein s11p | SAMN05660350_02906 | Not Available | Positive | 2999721 - 3000128 | 14487.5 |
| ssu ribosomal protein s4p | SAMN05660350_02907 | Not Available | Positive | 3000164 - 3000790 | 24040.2 |
| dna-directed rna polymerase subunit alpha | SAMN05660350_02908 | Not Available | Positive | 3000995 - 3002071 | 38875.0 |
| lsu ribosomal protein l17p | SAMN05660350_02909 | Not Available | Positive | 3002225 - 3002908 | 23329.7 |
| large subunit ribosomal protein l17 | SAMN05660350_02910 | Not Available | Positive | 3002905 - 3003303 | 12831.1 |
| trna pseudouridine38-40 synthase | SAMN05660350_02911 | Not Available | Positive | 3003242 - 3004159 | 32554.0 |
| nad(p)h-binding | SAMN05660350_02912 | Not Available | Negative | 3004167 - 3004829 | 22659.1 |
| molybdopterin-guanine dinucleotide biosynthesis protein a | SAMN05660350_02913 | Not Available | Negative | 3004839 - 3005456 | 21280.0 |
| fdhd protein | SAMN05660350_02914 | Not Available | Positive | 3005515 - 3006333 | 28636.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

