Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ankyrin repeat | SAMN05660350_02805 | Not Available | Positive | 2905359 - 2906186 | 27882.6 |
| 2-oxoglutarate dehydrogenase e1 component | SAMN05660350_02806 | Not Available | Positive | 2906397 - 2910212 | 138658.0 |
| hypothetical protein | SAMN05660350_02807 | Not Available | Positive | 2910229 - 2910408 | 6837.81 |
| lexa-binding, inner membrane-associated putative hydrolase | SAMN05660350_02808 | Not Available | Positive | 2910628 - 2911341 | 24620.2 |
| malate dehydrogenase (oxaloacetate-decarboxylating) | SAMN05660350_02809 | Not Available | Negative | 2911541 - 2912728 | 40558.4 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN05660350_02810 | Not Available | Positive | 2912857 - 2913453 | 21226.0 |
| nickel-type superoxide dismutase maturation protease | SAMN05660350_02811 | Not Available | Negative | 2913450 - 2913791 | 12164.9 |
| nickel superoxide dismutase | SAMN05660350_02812 | Not Available | Positive | 2913875 - 2914276 | 15183.1 |
| thiamine pyrophosphate enzyme, c-terminal tpp binding domain | SAMN05660350_02813 | Not Available | Positive | 2914492 - 2915259 | 26057.6 |
| isochorismate synthase | SAMN05660350_02814 | Not Available | Negative | 2915401 - 2916660 | 42879.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

