Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor rho | SAMN05660350_02785 | Not Available | Negative | 2882648 - 2884774 | 75969.7 |
| homoserine kinase | SAMN05660350_02786 | Not Available | Negative | 2885023 - 2886099 | 36444.3 |
| threonine synthase | SAMN05660350_02787 | Not Available | Negative | 2886096 - 2887181 | 37361.7 |
| homoserine dehydrogenase | SAMN05660350_02788 | Not Available | Negative | 2887178 - 2888470 | 43709.2 |
| diaminopimelate decarboxylase | SAMN05660350_02789 | Not Available | Negative | 2888467 - 2889957 | 51646.6 |
| arginyl-trna synthetase | SAMN05660350_02790 | Not Available | Negative | 2889954 - 2891615 | 59646.8 |
| protein of unknown function | SAMN05660350_02791 | Not Available | Positive | 2891816 - 2892589 | 26859.8 |
| uncharacterized conserved protein, duf305 family | SAMN05660350_02792 | Not Available | Positive | 2892586 - 2893239 | 22456.0 |
| Trna-arg | Not Available | Not Available | Positive | 2893299 - 2893373 | Not Available |
| aromatic ring-opening dioxygenase, catalytic subunit, ligb family | SAMN05660350_02794 | Not Available | Positive | 2893624 - 2894502 | 31240.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

