Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytoene dehydrogenase-related protein | SAMN05660350_02745 | Not Available | Negative | 2844195 - 2845679 | 53262.4 |
| lao/ao transport system kinase | SAMN05660350_02746 | Not Available | Negative | 2845695 - 2846741 | 36105.1 |
| acetyl-coa c-acetyltransferase | SAMN05660350_02747 | Not Available | Negative | 2846738 - 2847997 | 42630.8 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05660350_02748 | Not Available | Positive | 2848130 - 2848978 | 30586.8 |
| methylmalonyl-coa epimerase | SAMN05660350_02749 | Not Available | Positive | 2849229 - 2849684 | 16285.3 |
| crotonyl-coa carboxylase/reductase | SAMN05660350_02750 | Not Available | Positive | 2849790 - 2851121 | 48733.1 |
| hypothetical protein | SAMN05660350_02751 | Not Available | Positive | 2851325 - 2852593 | 45750.3 |
| sortase (surface protein transpeptidase) | SAMN05660350_02752 | Not Available | Positive | 2852898 - 2854430 | 50995.3 |
| hypothetical protein | SAMN05660350_02753 | Not Available | Negative | 2854541 - 2854777 | 8962.3 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN05660350_02754 | Not Available | Negative | 2854851 - 2856647 | 63939.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

