Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05660350_02695 | Not Available | Negative | 2781832 - 2782545 | 25040.9 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | SAMN05660350_02696 | Not Available | Negative | 2782547 - 2783041 | 16808.2 |
| hypothetical protein | SAMN05660350_02697 | Not Available | Negative | 2783124 - 2784023 | 30103.1 |
| protein of unknown function | SAMN05660350_02698 | Not Available | Negative | 2784166 - 2784468 | 11254.8 |
| predicted kinase, aminoglycoside phosphotransferase (apt) family | SAMN05660350_02699 | Not Available | Positive | 2784801 - 2785835 | 36890.8 |
| lytr cell envelope-related transcriptional attenuator | SAMN05660350_02700 | Not Available | Positive | 2785895 - 2786434 | 18460.5 |
| myo-inositol-1(or 4)-monophosphatase | SAMN05660350_02701 | Not Available | Negative | 2786544 - 2787359 | 27688.9 |
| polyphosphate glucokinase | SAMN05660350_02702 | Not Available | Positive | 2787418 - 2788161 | 26222.4 |
| rna polymerase primary sigma factor | SAMN05660350_02703 | Not Available | Positive | 2788461 - 2789750 | 47093.7 |
| fad/fmn-containing dehydrogenase | SAMN05660350_02704 | Not Available | Negative | 2790068 - 2791438 | 48052.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

