Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05660350_02675 | Not Available | Negative | 2761268 - 2761756 | 18168.1 |
| chlorite dismutase | SAMN05660350_02676 | Not Available | Negative | 2761753 - 2762469 | 27732.9 |
| udp-galactopyranose mutase | SAMN05660350_02677 | Not Available | Negative | 2762762 - 2764147 | 47093.8 |
| uroporphyrinogen decarboxylase | SAMN05660350_02678 | Not Available | Negative | 2764144 - 2765226 | 37991.6 |
| protein of unknown function | SAMN05660350_02679 | Not Available | Positive | 2765298 - 2765927 | 21893.3 |
| ribonuclease d | SAMN05660350_02680 | Not Available | Positive | 2766183 - 2767310 | 40606.5 |
| acetyl-coa acyltransferase | SAMN05660350_02681 | Not Available | Positive | 2767562 - 2768728 | 40679.6 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN05660350_02682 | Not Available | Positive | 2768725 - 2770809 | 73009.7 |
| uncharacterized conserved protein yqgv, upf0045/duf77 family | SAMN05660350_02683 | Not Available | Negative | 2770957 - 2771241 | 9774.59 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN05660350_02684 | Not Available | Negative | 2771238 - 2773154 | 67854.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

