Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-(3-hydroxy-phenyl)propionate hydroxylase | SAMN05660350_02625 | Not Available | Positive | 2711436 - 2713220 | 63672.6 |
| homogentisate 1,2-dioxygenase | SAMN05660350_02626 | Not Available | Positive | 2713237 - 2714442 | 44144.6 |
| hypothetical protein | SAMN05660350_02627 | Not Available | Positive | 2714439 - 2715317 | 29403.3 |
| fumarylacetoacetate hydrolase | SAMN05660350_02628 | Not Available | Positive | 2715314 - 2716516 | 42754.5 |
| transcriptional regulator, iclr family | SAMN05660350_02629 | Not Available | Positive | 2716592 - 2717284 | 24096.0 |
| acetolactate synthase large subunit | SAMN05660350_02630 | Not Available | Negative | 2717391 - 2719103 | 59164.7 |
| hypothetical protein | SAMN05660350_02631 | Not Available | Negative | 2719239 - 2719529 | 9724.5 |
| predicted arabinose efflux permease, mfs family | SAMN05660350_02632 | Not Available | Positive | 2719949 - 2721337 | 50062.2 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN05660350_02633 | Not Available | Positive | 2721541 - 2722398 | 29402.4 |
| oxepin-coa hydrolase / 3-oxo-5,6-dehydrosuberyl-coa semialdehyde dehydrogenase | SAMN05660350_02634 | Not Available | Negative | 2722706 - 2724757 | 71943.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

