Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| snoal-like domain-containing protein | SAMN05660350_00238 | Not Available | Negative | 224523 - 225038 | 19024.6 |
| hypothetical protein | SAMN05660350_00239 | Not Available | Negative | 225053 - 225529 | 16760.9 |
| caax protease self-immunity | SAMN05660350_00240 | Not Available | Negative | 225533 - 226399 | 29714.7 |
| nucleoside-diphosphate-sugar epimerase | SAMN05660350_00241 | Not Available | Negative | 226519 - 227451 | 32384.6 |
| hypothetical protein | SAMN05660350_00242 | Not Available | Negative | 227629 - 227805 | 6534.74 |
| dna-binding transcriptional regulator, marr family | SAMN05660350_00243 | Not Available | Negative | 227933 - 228391 | 16298.5 |
| pyridoxamine 5'-phosphate oxidase family protein | SAMN05660350_00244 | Not Available | Positive | 228486 - 228851 | 13008.5 |
| nad(p)h dehydrogenase (quinone) | SAMN05660350_00245 | Not Available | Positive | 228960 - 229577 | 22247.0 |
| major facilitator superfamily protein | SAMN05660350_00246 | Not Available | Positive | 229687 - 230994 | 42909.6 |
| transcriptional regulator, arac family with amidase-like domain | SAMN05660350_00247 | Not Available | Negative | 231271 - 232245 | 34883.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

