Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit | SAMN05660350_02523 | Not Available | Positive | 2608284 - 2608649 | 13166.1 |
| fe-s cluster assembly atp-binding protein | SAMN05660350_02524 | Not Available | Positive | 2608665 - 2609468 | 28981.6 |
| cysteine desulfurase | SAMN05660350_02525 | Not Available | Positive | 2609465 - 2610793 | 47391.6 |
| nitrogen fixation protein nifu | SAMN05660350_02526 | Not Available | Positive | 2610793 - 2611290 | 17735.0 |
| metal-sulfur cluster biosynthetic enzyme | SAMN05660350_02527 | Not Available | Positive | 2611287 - 2611676 | 13780.2 |
| hypothetical protein | SAMN05660350_02528 | Not Available | Negative | 2611844 - 2613637 | 58615.0 |
| hypothetical protein | SAMN05660350_02529 | Not Available | Negative | 2613782 - 2615803 | 66147.1 |
| atpase components of abc transporters with duplicated atpase domains | SAMN05660350_02530 | Not Available | Positive | 2616053 - 2617654 | 57549.5 |
| transcriptional regulator | SAMN05660350_02531 | Not Available | Positive | 2618064 - 2618291 | 8034.28 |
| enoyl-coa hydratase | SAMN05660350_02532 | Not Available | Positive | 2618315 - 2619064 | 25667.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

