Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate isomerase | SAMN05660350_02513 | Not Available | Negative | 2595915 - 2597513 | 54471.8 |
| transaldolase | SAMN05660350_02514 | Not Available | Negative | 2597560 - 2598663 | 39743.4 |
| transketolase | SAMN05660350_02515 | Not Available | Negative | 2598749 - 2600974 | 79093.4 |
| hypothetical protein | SAMN05660350_02516 | Not Available | Positive | 2601224 - 2601358 | 4814.82 |
| protoheme ix farnesyltransferase | SAMN05660350_02517 | Not Available | Positive | 2601355 - 2602275 | 33340.7 |
| hypothetical protein | SAMN05660350_02518 | Not Available | Positive | 2602405 - 2603406 | 34580.8 |
| cytochrome c oxidase assembly protein subunit 15 | SAMN05660350_02519 | Not Available | Negative | 2603424 - 2604353 | 32018.6 |
| predicted transcriptional regulator, arsr family | SAMN05660350_02520 | Not Available | Positive | 2604560 - 2605516 | 33306.9 |
| iron-regulated abc transporter membrane component sufb | SAMN05660350_02521 | Not Available | Positive | 2605513 - 2606961 | 53486.9 |
| fe-s cluster assembly protein sufd | SAMN05660350_02522 | Not Available | Positive | 2606961 - 2608280 | 46027.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

