Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05660350_00218 | Not Available | Positive | 200565 - 201329 | 25782.8 |
| dna-binding transcriptional regulator, fadr family | SAMN05660350_00219 | Not Available | Positive | 201833 - 202543 | 25431.3 |
| dihydroxy-acid dehydratase | SAMN05660350_00220 | Not Available | Positive | 202649 - 204454 | 64549.1 |
| mn2+ and fe2+ transporters of the nramp family | SAMN05660350_00221 | Not Available | Positive | 204772 - 206178 | 50251.3 |
| dna-binding transcriptional regulator, fadr family | SAMN05660350_00222 | Not Available | Negative | 206255 - 206983 | 25912.9 |
| uncharacterized conserved protein ygbk, duf1537 family | SAMN05660350_00223 | Not Available | Positive | 207088 - 208536 | 49984.8 |
| putative dehydrogenase | SAMN05660350_00224 | Not Available | Positive | 208579 - 209451 | 29171.3 |
| altronate hydrolase | SAMN05660350_00225 | Not Available | Negative | 209491 - 211026 | 53858.2 |
| hypothetical protein | SAMN05660350_00226 | Not Available | Negative | 211067 - 212383 | 46362.3 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN05660350_00227 | Not Available | Negative | 212417 - 213412 | 34034.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

