Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-aminobutyrate aminotransferase apoenzyme | SAMN05660350_02350 | Not Available | Positive | 2421330 - 2422685 | 46736.0 |
| glutamate dehydrogenase | SAMN05660350_02351 | Not Available | Positive | 2422838 - 2425912 | 108656.0 |
| hypothetical protein | SAMN05660350_02352 | Not Available | Positive | 2426262 - 2426438 | 6094.87 |
| putative peptidoglycan binding domain-containing protein | SAMN05660350_02353 | Not Available | Positive | 2426435 - 2427109 | 24238.8 |
| lrp/asnc family transcriptional regulator, regulator for asna, asnc and gida | SAMN05660350_02354 | Not Available | Positive | 2427345 - 2427842 | 17798.3 |
| agmatinase | SAMN05660350_02355 | Not Available | Negative | 2427850 - 2428806 | 34008.2 |
| transcriptional regulator, xre family with cupin sensor | SAMN05660350_02356 | Not Available | Positive | 2428932 - 2429531 | 20337.2 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN05660350_02357 | Not Available | Positive | 2429647 - 2431092 | 49846.9 |
| predicted amidohydrolase | SAMN05660350_02358 | Not Available | Positive | 2431095 - 2431892 | 27428.8 |
| tryptophan 2-monooxygenase | SAMN05660350_02359 | Not Available | Positive | 2431889 - 2433589 | 62812.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

