Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase subunit b | SAMN05660350_02340 | Not Available | Positive | 2408858 - 2409901 | 36598.9 |
| 2-hydroxycyclohexanecarboxyl-coa dehydrogenase | SAMN05660350_02341 | Not Available | Positive | 2409932 - 2410693 | 25727.3 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05660350_02342 | Not Available | Positive | 2410934 - 2411689 | 25910.9 |
| hydroxypyruvate isomerase | SAMN05660350_02343 | Not Available | Positive | 2412326 - 2412502 | 6351.51 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05660350_02344 | Not Available | Negative | 2412612 - 2413499 | 30991.5 |
| glycolate oxidase | SAMN05660350_02345 | Not Available | Negative | 2413496 - 2414905 | 48433.9 |
| sugar phosphate permease | SAMN05660350_02346 | Not Available | Negative | 2414946 - 2416283 | 48127.1 |
| aldehyde dehydrogenase (nad+) | SAMN05660350_02347 | Not Available | Positive | 2416451 - 2417884 | 49776.1 |
| betaine-aldehyde dehydrogenase | SAMN05660350_02348 | Not Available | Negative | 2418124 - 2419569 | 51538.8 |
| purine catabolism regulatory protein | SAMN05660350_02349 | Not Available | Negative | 2419681 - 2421189 | 51244.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

