Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylserine decarboxylase | SAMN05660350_02310 | Not Available | Negative | 2372063 - 2372752 | 24822.8 |
| phnb protein | SAMN05660350_02311 | Not Available | Negative | 2372834 - 2373247 | 14694.0 |
| alcohol dehydrogenase groes-like domain-containing protein | SAMN05660350_02312 | Not Available | Negative | 2373477 - 2373979 | 17272.7 |
| serine hydroxymethyltransferase | SAMN05660350_02313 | Not Available | Positive | 2374225 - 2375553 | 47258.4 |
| sarcosine oxidase subunit beta | SAMN05660350_02314 | Not Available | Positive | 2375550 - 2376809 | 45043.4 |
| sarcosine oxidase subunit delta | SAMN05660350_02315 | Not Available | Positive | 2376839 - 2377150 | 12069.0 |
| sarcosine oxidase subunit alpha | SAMN05660350_02316 | Not Available | Positive | 2377147 - 2380014 | 101368.0 |
| sarcosine oxidase subunit gamma | SAMN05660350_02317 | Not Available | Positive | 2380007 - 2380591 | 20209.0 |
| dimethylglycine oxidase | SAMN05660350_02318 | Not Available | Positive | 2380644 - 2383112 | 89320.7 |
| formiminotetrahydrofolate cyclodeaminase | SAMN05660350_02319 | Not Available | Positive | 2383128 - 2383748 | 20948.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

