Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dsba-like thioredoxin domain-containing protein | SAMN05660350_00208 | Not Available | Positive | 191111 - 191773 | 24134.7 |
| short-chain dehydrogenase | SAMN05660350_00209 | Not Available | Positive | 191965 - 192738 | 26958.8 |
| predicted nuclease (rnase h fold) | SAMN05660350_00210 | Not Available | Negative | 192910 - 193578 | 23242.9 |
| ribose 5-phosphate isomerase b | SAMN05660350_00211 | Not Available | Positive | 193606 - 194097 | 17905.8 |
| predicted acetyltransferase | SAMN05660350_00212 | Not Available | Negative | 194094 - 195335 | 45346.4 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05660350_00213 | Not Available | Negative | 195376 - 196128 | 26338.2 |
| peptidyl-trna hydrolase, pth2 family | SAMN05660350_00214 | Not Available | Negative | 196125 - 196442 | 10565.3 |
| hypothetical protein | SAMN05660350_00215 | Not Available | Positive | 196624 - 198270 | 56069.5 |
| rna polymerase, sigma subunit, ecf family | SAMN05660350_00216 | Not Available | Positive | 198347 - 199321 | 36098.2 |
| uncharacterized protein | SAMN05660350_00217 | Not Available | Negative | 199372 - 200256 | 31470.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

