Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 2337321 - 2337397 | Not Available |
| cytochrome p450 | SAMN05660350_02271 | Not Available | Positive | 2337530 - 2338819 | 47057.0 |
| ferredoxin | SAMN05660350_02272 | Not Available | Positive | 2338819 - 2339010 | 6544.77 |
| hypothetical protein | SAMN05660350_02273 | Not Available | Positive | 2339331 - 2339618 | 10549.2 |
| catechol 2,3-dioxygenase | SAMN05660350_02274 | Not Available | Negative | 2339734 - 2340243 | 18834.1 |
| polysaccharide pyruvyl transferase | SAMN05660350_02275 | Not Available | Positive | 2340347 - 2341216 | 31486.3 |
| methionine aminopeptidase, type i | SAMN05660350_02276 | Not Available | Positive | 2341247 - 2342017 | 25883.7 |
| cystathionine gamma-lyase | SAMN05660350_02277 | Not Available | Negative | 2342106 - 2343263 | 40259.7 |
| cystathionine beta-synthase | SAMN05660350_02278 | Not Available | Negative | 2343341 - 2344750 | 49188.2 |
| aldo/keto reductase | SAMN05660350_02279 | Not Available | Positive | 2344837 - 2345643 | 29002.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

