Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted dehydrogenase | SAMN05660350_02170 | Not Available | Negative | 2224837 - 2225790 | 34578.9 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN05660350_02171 | Not Available | Negative | 2225787 - 2226890 | 39444.1 |
| transferase hexapeptide (six repeat-containing protein) | SAMN05660350_02172 | Not Available | Negative | 2226887 - 2227480 | 20463.2 |
| methyltransferase domain-containing protein | SAMN05660350_02173 | Not Available | Positive | 2227787 - 2228656 | 31567.2 |
| excalibur calcium-binding domain-containing protein | SAMN05660350_02174 | Not Available | Positive | 2228695 - 2229603 | 31553.4 |
| adenosylhomocysteinase | SAMN05660350_02175 | Not Available | Positive | 2229751 - 2231232 | 53096.0 |
| two-component system, ompr family, response regulator mtra | SAMN05660350_02176 | Not Available | Positive | 2231469 - 2232185 | 25978.5 |
| two-component system, ompr family, sensor histidine kinase mtrb | SAMN05660350_02177 | Not Available | Positive | 2232274 - 2234019 | 61813.0 |
| sporulation and spore germination | SAMN05660350_02178 | Not Available | Positive | 2234016 - 2235743 | 59338.0 |
| predicted amidophosphoribosyltransferases | SAMN05660350_02179 | Not Available | Positive | 2236004 - 2236774 | 25782.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

