Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | SAMN05660350_02050 | Not Available | Negative | 2104152 - 2105207 | 36461.7 |
| shikimate kinase | SAMN05660350_02051 | Not Available | Negative | 2105204 - 2105890 | 22867.3 |
| chorismate synthase | SAMN05660350_02052 | Not Available | Negative | 2105887 - 2107080 | 41436.6 |
| leader peptidase (prepilin peptidase) / n-methyltransferase | SAMN05660350_02053 | Not Available | Negative | 2107207 - 2107881 | 21700.3 |
| shikimate dehydrogenase | SAMN05660350_02054 | Not Available | Negative | 2107887 - 2108690 | 27109.7 |
| upf0755 protein | SAMN05660350_02055 | Not Available | Negative | 2108713 - 2110329 | 56010.5 |
| putative holliday junction resolvase | SAMN05660350_02056 | Not Available | Negative | 2110403 - 2111071 | 23639.1 |
| alanyl-trna synthetase | SAMN05660350_02057 | Not Available | Negative | 2111077 - 2113773 | 96674.4 |
| hypothetical protein | SAMN05660350_02058 | Not Available | Negative | 2113836 - 2114114 | 9758.81 |
| uncharacterized protein yoxc, contains an mcp-like domain | SAMN05660350_02059 | Not Available | Negative | 2114114 - 2114539 | 14685.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

