Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05660350_02000 | Not Available | Positive | 2050343 - 2052226 | 63853.9 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05660350_02001 | Not Available | Negative | 2052320 - 2053240 | 30917.8 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN05660350_02002 | Not Available | Negative | 2053380 - 2054126 | 26153.2 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | SAMN05660350_02003 | Not Available | Positive | 2054205 - 2055857 | 58889.8 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05660350_02004 | Not Available | Negative | 2056012 - 2056770 | 26396.4 |
| hypothetical protein | SAMN05660350_02005 | Not Available | Negative | 2057001 - 2057744 | 27280.6 |
| purine catabolism regulatory protein | SAMN05660350_02006 | Not Available | Negative | 2057810 - 2059666 | 65411.6 |
| protein of unknown function | SAMN05660350_02007 | Not Available | Positive | 2060033 - 2061043 | 34011.4 |
| atp phosphoribosyltransferase (homohexameric) | SAMN05660350_02008 | Not Available | Negative | 2061305 - 2062171 | 30982.4 |
| phosphoribosyl-atp pyrophosphatase | SAMN05660350_02009 | Not Available | Negative | 2062314 - 2062577 | 9296.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

