Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN05660350_00178 | Not Available | Negative | 157502 - 159574 | 74379.5 |
| flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase) | SAMN05660350_00179 | Not Available | Positive | 159626 - 160663 | 37449.5 |
| hemolysin, contains cbs domains | SAMN05660350_00180 | Not Available | Negative | 161028 - 162065 | 36015.8 |
| hemolysin, contains cbs domains | SAMN05660350_00181 | Not Available | Negative | 162062 - 163492 | 50725.0 |
| Trna-arg | Not Available | Not Available | Positive | 163893 - 163968 | Not Available |
| hypothetical protein | SAMN05660350_00183 | Not Available | Negative | 164059 - 164421 | 12968.3 |
| hypothetical protein | SAMN05660350_00184 | Not Available | Positive | 164586 - 166601 | 71841.5 |
| single-strand dna-binding protein | SAMN05660350_00185 | Not Available | Positive | 167238 - 167735 | 17640.3 |
| atp-binding cassette protein, chvd family | SAMN05660350_00186 | Not Available | Positive | 167838 - 169508 | 61350.0 |
| acyl-coa thioester hydrolase | SAMN05660350_00187 | Not Available | Positive | 169686 - 170090 | 15388.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

