Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05660350_01970 | Not Available | Positive | 2016702 - 2017454 | 25205.3 |
| hypothetical protein | SAMN05660350_01971 | Not Available | Negative | 2017566 - 2018825 | 45058.6 |
| concanavalin a-like lectin/glucanases superfamily protein | SAMN05660350_01972 | Not Available | Negative | 2018872 - 2020539 | 56111.8 |
| hypothetical protein | SAMN05660350_01973 | Not Available | Negative | 2020810 - 2021526 | 24574.6 |
| osmoprotectant transport system substrate-binding protein | SAMN05660350_01974 | Not Available | Negative | 2021800 - 2022810 | 33864.4 |
| osmoprotectant transport system permease protein | SAMN05660350_01975 | Not Available | Negative | 2023010 - 2023741 | 25030.1 |
| osmoprotectant transport system permease protein | SAMN05660350_01976 | Not Available | Negative | 2023738 - 2024469 | 25261.4 |
| dna-binding transcriptional regulator, lysr family | SAMN05660350_01977 | Not Available | Negative | 2024984 - 2025886 | 33488.9 |
| inner membrane transporter rhta | SAMN05660350_01978 | Not Available | Positive | 2025914 - 2026873 | 32956.8 |
| protein of unknown function | SAMN05660350_01979 | Not Available | Negative | 2027085 - 2028671 | 54161.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

