Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05660350_01960 | Not Available | Negative | 2007649 - 2007849 | 7014.37 |
| hypothetical protein | SAMN05660350_01961 | Not Available | Negative | 2007924 - 2008247 | 11135.2 |
| lsr2 protein | SAMN05660350_01962 | Not Available | Negative | 2008502 - 2008855 | 12592.5 |
| lysyl-trna synthetase, class ii | SAMN05660350_01963 | Not Available | Negative | 2009006 - 2010511 | 55920.8 |
| pantothenate kinase | SAMN05660350_01964 | Not Available | Negative | 2010523 - 2011344 | 28202.1 |
| nicotinate-nucleotide pyrophosphorylase | SAMN05660350_01965 | Not Available | Negative | 2011348 - 2012256 | 30627.7 |
| l-aspartate oxidase | SAMN05660350_01966 | Not Available | Negative | 2012348 - 2014048 | 57567.5 |
| l-aspartate 1-decarboxylase | SAMN05660350_01967 | Not Available | Negative | 2014101 - 2014526 | 14678.6 |
| pantothenate synthetase | SAMN05660350_01968 | Not Available | Negative | 2014523 - 2015449 | 31639.8 |
| predicted oxidoreductase, contains short-chain dehydrogenase (sdr) and duf2520 domains | SAMN05660350_01969 | Not Available | Negative | 2015478 - 2016437 | 32212.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

