Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxybenzoate polyprenyltransferase | SAMN05660350_01950 | Not Available | Positive | 1995383 - 1996231 | 27409.8 |
| hypothetical protein | SAMN05660350_01951 | Not Available | Negative | 1996250 - 1997104 | 28021.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05660350_01952 | Not Available | Negative | 1997101 - 1997724 | 22355.5 |
| deoxyribodipyrimidine photolyase-related protein | SAMN05660350_01953 | Not Available | Negative | 1997815 - 1999401 | 59861.7 |
| protein of unknown function | SAMN05660350_01954 | Not Available | Positive | 1999502 - 2000320 | 27128.2 |
| dna repair protein rada/sms | SAMN05660350_01955 | Not Available | Positive | 2000442 - 2001791 | 45855.4 |
| diadenylate cyclase | SAMN05660350_01956 | Not Available | Positive | 2001903 - 2003036 | 40761.6 |
| hypothetical protein | SAMN05660350_01957 | Not Available | Negative | 2003005 - 2003775 | 25770.7 |
| a/g-specific dna-adenine glycosylase | SAMN05660350_01958 | Not Available | Positive | 2003787 - 2004689 | 32112.6 |
| atp-dependent clp protease atp-binding subunit clpc | SAMN05660350_01959 | Not Available | Negative | 2004866 - 2007391 | 93029.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

