Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fibronectin type iii domain-containing protein | SAMN05660350_01910 | Not Available | Positive | 1955130 - 1956986 | 62592.3 |
| glucose-6-phosphate 1-dehydrogenase | SAMN05660350_01911 | Not Available | Positive | 1957102 - 1958505 | 50845.9 |
| chaperonin groel | SAMN05660350_01912 | Not Available | Negative | 1958697 - 1960325 | 56979.3 |
| short-chain dehydrogenase | SAMN05660350_01913 | Not Available | Negative | 1960579 - 1961475 | 30522.9 |
| cold shock protein (beta-ribbon, cspa family) | SAMN05660350_01914 | Not Available | Negative | 1961703 - 1961903 | 7170.36 |
| threonine synthase | SAMN05660350_01915 | Not Available | Negative | 1962102 - 1963421 | 45987.4 |
| hypothetical protein | SAMN05660350_01916 | Not Available | Positive | 1963624 - 1964445 | 29134.7 |
| abc-2 type transport system permease protein | SAMN05660350_01917 | Not Available | Negative | 1964482 - 1965414 | 33444.7 |
| abc-2 type transport system atp-binding protein | SAMN05660350_01918 | Not Available | Negative | 1965411 - 1968329 | 99050.5 |
| lytr cell envelope-related transcriptional attenuator | SAMN05660350_01919 | Not Available | Negative | 1968383 - 1969675 | 45015.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

