Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted nucleic acid-binding protein, contains pin domain | SAMN05660350_01900 | Not Available | Positive | 1943468 - 1943860 | 13421.1 |
| superfamily ii dna or rna helicase | SAMN05660350_01901 | Not Available | Positive | 1944057 - 1945850 | 64910.1 |
| regulatory protein, luxr family | SAMN05660350_01902 | Not Available | Negative | 1945968 - 1948982 | 105063.0 |
| hypothetical protein | SAMN05660350_01903 | Not Available | Negative | 1949022 - 1949150 | 5037.1 |
| mfs transporter, mhs family, alpha-ketoglutarate permease | SAMN05660350_01904 | Not Available | Negative | 1949271 - 1950575 | 47061.9 |
| acetylornithine deacetylase | SAMN05660350_01905 | Not Available | Positive | 1950775 - 1952151 | 47476.4 |
| predicted metal-dependent phosphohydrolase, hd superfamily | SAMN05660350_01906 | Not Available | Positive | 1952148 - 1952777 | 22291.2 |
| protein of unknown function | SAMN05660350_01907 | Not Available | Negative | 1952746 - 1953024 | 10074.1 |
| predicted dehydrogenase | SAMN05660350_01908 | Not Available | Positive | 1953061 - 1954059 | 35440.0 |
| uncharacterized conserved protein yece, duf72 family | SAMN05660350_01909 | Not Available | Negative | 1954064 - 1954903 | 31289.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

