Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system atp-binding protein | SAMN05660350_01860 | Not Available | Negative | 1905705 - 1906613 | 32456.2 |
| dna polymerase | SAMN05660350_01861 | Not Available | Positive | 1906703 - 1907377 | 24172.6 |
| peroxiredoxin, ohr subfamily | SAMN05660350_01862 | Not Available | Positive | 1907632 - 1908075 | 15145.6 |
| predicted arabinose efflux permease, mfs family | SAMN05660350_01863 | Not Available | Negative | 1908160 - 1909491 | 45338.6 |
| pyridoxamine 5'-phosphate oxidase | SAMN05660350_01864 | Not Available | Negative | 1909488 - 1910162 | 24593.9 |
| citrate synthase | SAMN05660350_01865 | Not Available | Positive | 1910386 - 1911510 | 40694.6 |
| phosphoserine aminotransferase apoenzyme | SAMN05660350_01866 | Not Available | Positive | 1911603 - 1912715 | 39112.1 |
| protein of unknown function | SAMN05660350_01867 | Not Available | Positive | 1912945 - 1913889 | 34179.0 |
| hypothetical protein | SAMN05660350_01868 | Not Available | Positive | 1914034 - 1914507 | 16558.0 |
| trna g18 (ribose-2'-o)-methylase spou | SAMN05660350_01869 | Not Available | Negative | 1914594 - 1915403 | 28277.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

